Welcome to pyphylogenomics’s documentation!¶
Contents:
- PyPhyloGenomics A package to work on Phylogenomics
- Installation
- Usage
- Finding candidate genes from Bombyx mori
- Validation of exon structure
- Small break
- Exon Alignment
- Primer design
- Analysis of raw data output from IonTorrent
- Prepare raw NGS data
- Find reads matching target genes
- Separate gene bins according to indexes (or barcodes)
- Assembly of reads into consensus sequences
- History
- pyphylogenomics Package